Project name: Single cell RNA-seq reveals malignant and stromal programs associated with invasion and metastasis in head and neck cancer

Description: This study of head and neck cancer aimed to profile individual malignant, stromal, and immune cells in treatment-naive oral cavity squamous cell carcinoma, with or without matched metastatic cervical lymph nodes. Clinical and pathologic information was collected on all patients, in addition to a fresh biopsy sample from the primary tumor and/or metastatic lymph node at the time of initial surgery. Biopsy specimens were processed for single cell RNA-seq and/or whole exome sequencing. A total of ~6,000 single cells from 18 participants were included in the final dataset.

Data type: Phenotype or Genotype

Sample scope: Multiisolate

Relevance: Medical

Last updated: 2017-10-25