Quantitative proteomics cell bilayer (qPCB) method for studying cell-cell communication
Source: NCBI BioProject (ID PRJNA186076)

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Project name: Mus musculus
Description: Cellular communication is a fundamental process in biology. We developed an in vitro procedure for quantitatively analyzing proteome-wide changes triggered by interaction of different cell types. Using an adipocyte-macrophage bilayer co-culture model we detected thousands of proteins and deciphered regulatory pathways involved in low-grade inflammation leading to insulin resistance. The method can be applied for multiple cell-cell combinations to gain understanding in cellular interaction.Overall design: 2 cell lines (3T3-L1 adipocytes [A] and RAW 264.7 macrophages [R]), cultivated both as monolayer (condition 1 [O]) and together in a bilayer experiment (condition 2 [B]); 2-3 biological replicates per treatment (10 samples in total)
Data type: Transcriptome or Gene expression
Sample scope: Multiisolate
Relevance: ModelOrganism
Organization: Sauer, Otto Warburg Laboratory, Max Planck-Institute for Molecular Genetics
Last updated: 2013-01-10