Digital transcriptome analysis of genes on sex chromosomes in papaya (Carica papaya)
Source: NCBI BioProject (ID PRJNA143415)
Source: NCBI BioProject (ID PRJNA143415)
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Project name: Carica papaya
Description: For identifying genes for sex determination in papaya, digital gene expression analysis by Ht-SuperSAGE (Matsumura et al., 2010) was carried out in flowers from male, female and hermaphrodite plants of papaya. Total more than 9,273,744 26bp-tags were obtained by sequence analysis using SOLiD3 and mapped on papaya primitive sex chromosome sequences.Overall design: 6 samples examined: male young flowerbud, male mature flower bud, female young flower bud, female mature flower bud, hermaphrodite young flower bud, hermaphrodite mature flower bud
Data type: Transcriptome or Gene expression
Sample scope: Multiisolate
Relevance: Agricultural
Organization: Gene Research Center, Shinshu University
Literatures
- PMID: 22815863
Release date: 2012-07-16
Last updated: 2011-07-01