Flysta3D is an extensive multi-omics atlas that encompasses the developmental life span of Drosophila, from embryonic to pupal stages. The datasets included in this atlas feature 3D single-cell spatial transcriptomics, single-cell transcriptomics, and single-cell chromatin accessibility profiles. By constructing trajectories of cell states, Flysta3D unveils the intricate regulatory mechanisms governing tissue development. Offering an unprecedented wealth of resources, Flysta3D propels research into Drosophila development by providing integrated multi-omics data at an ultra-high spatial and temporal resolution.
Explore and visualize gene expression, transcription factor regulons, signaling pathways, and more within a 3D spatiotemporal context
Examine gene expression patterns and tissue annotations in single-cell transcriptomic data, with an option to integrate single-cell chromatin accessibility data
Track chromatin accessibility profiles and transcription factor motif dynamics during development
Protocols for Stereo-seq library preparation and sequencing
Inspect 3D reconstructed models. Access available raw data and data analysis software
Access available processed data and metadata