Dynamic immune recovery process after liver transplantation revealed by single-cell multi-omics analysis

Basic information
Cell
37,158
Sample
69

Technology
To be supplemented.
Omics
scRNA-seq
Source
PBMCs

Dataset ID
38510071
Platform
Illumina NovaSeq 6000
Species
Human
Disease
LT,Healthy
Age range
23 - 55
Update date
2024-03-01
Summary

Elucidating the temporal process of immune remodeling under immunosuppressive treatment after liver transplantation (LT) is critical for precise clinical management strategies. Here, we performed a single-cell multi-omics analysis of peripheral blood mononuclear cells (PBMCs) collected from LT patients (with and without acute cellular rejection [ACR]) at 13 time points. Validation was performed in two independent cohorts with additional LT patients and healthy controls. Our study revealed a four-phase recovery process after LT and delineated changes in immune cell composition, expression programs, and interactions along this process. The intensity of the immune response differs between the ACR and non-ACR patients. Notably, the newly identified inflamed NK cells, CD14+RNASE2+ monocytes, and FOS-expressing monocytes emerged as predictive indicators of ACR. This study illuminates the longitudinal evolution of the immune cell landscape under tacrolimus-based immunosuppressive treatment during LT recovery, providing a four-phase framework that aids the clinical management of LT patients.

Overall design

Reestablishment of immune homeostasis under the tacrolimus-based immunosuppressive treatment after liver transplantation (LT) is essential for long-term graft survival. Herein, we mapped the dynamic immune cell compositions and functions alteration of the peripheral immune microenvironment at single-cell resolution in patients with and without acute cellular rejection (ACR) in the scenario with treatment of tacrolimus based immunosuppressive regimen after LT.

Contributors

To be supplemented.

Contact

To be supplemented.

snRNA-Seq
Sample nameSample titleDiseaseGenderAgeSourceTreatmentTechnologyPlatformOmicsSample IDDataset IDAction
No data available