The Tabula Sapiens: A multiple-organ, single-cell transcriptomic atlas of humans

Basic information
Cell
62,412

Technology
10X Genomics
Smart-Seq2
Omics
scRNA-seq
Source
PBMCs,Bone Marrow

Dataset ID
35549404
Platform
Illumina NovaSeq 6000
Species
Human
Disease
Various in medical backgrounds
Age range
22 - 69
Update date
2022-05-13
Summary

Molecular characterization of cell types using single-cell transcriptome sequencing is revolutionizing cell biology and enabling new insights into the physiology of human organs. We created a human reference atlas comprising nearly 500,000 cells from 24 different tissues and organs, many from the same donor. This atlas enabled molecular characterization of more than 400 cell types, their distribution across tissues, and tissue-specific variation in gene expression. Using multiple tissues from a single donor enabled identification of the clonal distribution of T cells between tissues, identification of the tissue-specific mutation rate in B cells, and analysis of the cell cycle state and proliferative potential of shared cell types across tissues. Cell type-specific RNA splicing was discovered and analyzed across tissues within an individual.

Overall design

Tabula Sapiens is a single cell transcriptomic atlas of 24 human tissues and organs.

Contributors

The Tabula Sapiens Consortium Overall project direction and coordination†✉️: Robert C. Jones, Jim Karkanias, Mark A. Krasnow, Angela Oliveira Pisco, Stephen R. Quake, Julia Salzman, Nir Yosef

Contact

To be supplemented.

snRNA-Seq
Sample nameSample titleDiseaseGenderAgeSourceTreatmentTechnologyPlatformOmicsSample IDDataset IDAction
No data available