Flysta3d: High-resolution 3D spatiotemporal transcriptomic maps of developing Drosophila embryos and larvae

Flysta3D is intended to curate 3D spatial transcriptomes of all stages of Drosophila embryos and larvae generated by Stereo-seq. It could visualize and analyze spatial expression patterns of genes of interest, 3D reconstruct tissue-specific spatial transcriptomes by clustering and annotation, simulate tissue developmental trajectory across development, identify cell signalling pathways and gene regulatory networks, examine gene functions in their intact spatial context, etc.

Release at 2022-05-04

Wang, M., Hu, Q., Lv, T., Wang, Y., Lan, Q., Xiang, R., ... & Liu, L. (2022). High-resolution 3D spatiotemporal transcriptomic maps of developing Drosophila embryos and larvae. Developmental Cell, 57(10), 1271-1283. DOI: 10.1016/j.devcel.2022.04.006