Whole Genome Sequencing-Based Comparison of Food Isolates of Cronobacter sakazakii
Source: NCBI BioProject (ID PRJNA510032)

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Project name: Cronobacter sakazakii
Description: Cronobacter sakazakii is an emerging foodborne pathogen, which is linked to life-threatening infections causing septicemia, meningitis, and necrotizing enterocolitis. These infections have been epidemiologically connected to ingestion of contaminated reconstituted powder infant formula. Even at low water activity C. sakazakii can survive for a long time; it is capable of protective biofilm formation and occasionally shows high virulence and pathogenicity even following stressful environmental conditions. Hence it is a challenging task for the food industry to control contamination of food ingredients and products through the entire production chain, since an increasing number of severe food-related outbreaks of C. sakazakii infections has been observed. The seemingly great capability of C. sakazakii to survive even strict countermeasures combined with its prevalence in many food ingredients requires a greater in depth understanding of its virulence factors to master the food safety issues related to this organism. In this context, we present the whole genome sequence (WGS) of two different C. sakazakii isolated from skimmed milk powder (C7) and ready-to-eat salad mix (C8), respectively.
Data type: Genome sequencing and assembly
Sample scope: Multiisolate
Organization: Boku University
Release date: 2019-07-10
Last updated: 2018-12-14
Statistics: 2 samples; 2 experiments; 2 runs