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PRJNA186455
BioTile Identification of Differentially Methylated Regions in Tiling Microarray Data
Source: NCBI BioProject (ID PRJNA186455)

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Project name: Mus musculus
Description: This submission includes simulated data generated to test the BioTile algorithm's capability of identifying differentially methylated regions (DMR) located within an actual tiling array dataset.Overall design: The data submitted was generated in silico to closely resemble DNA methylation profiles using Affymetrix Mouse Promoter 1.0R Tiling arrays. This simulated dataset of 40 arrays was generated using the "rnorm" function in R to create probe-wise distributions with the same mean and variance as our previously measured dataset (GSE43460).
Data type: Other
Sample scope: Multiisolate
Relevance: ModelOrganism
Organization: Johns Hopkins University
Literatures
  1. PMID: 23452827
Last updated: 2013-01-11