Expression data from peripheral blood - blood draws at Pre and Post time points of Allergen inhalation challenge (PAX.NGR)
Source: NCBI BioProject (ID PRJNA156469)
Source: NCBI BioProject (ID PRJNA156469)
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Project name: Homo sapiens
Description: Detecting differential changes in the peripheral whole-blood transcriptome, post-challenge compared to pre-challenge; using non-globin reduced PAXgene (PAX.NGR) tubesBlood was collected immediately prior to, and two hours after challengeOverall design: Preprocessing and filtering were applied to the PAX.NGR dataset using the Factor Analysis for Robust MicroArray Summarization (farms) package in RThe Linear Models for MicroArrays (limma) package in R was used to determine differential gene expression using a Benjamini Hochberg FDR of 5%.
Data type: Transcriptome or Gene expression
Sample scope: Multiisolate
Relevance: Medical
Organization: James Hogg Research Centre, Medicine, University of British Columbia
Literatures
- PMID: 22316092
Release date: 2012-01-26
Last updated: 2011-12-05