Transcriptome-Wide Binding Sites for Components of the Saccharomyces cerevisiae Non-poly(A) termination Pathway: Nrd1, Nab3 and Sen1
Source: NCBI BioProject (ID PRJNA145183)

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Project name: Saccharomyces cerevisiae
Description: We report here the transcriptome-wide distribution of yeast Rpb2, Sen1, Nrd1 and Nab3 binding sites. These data sets provide highresolution definition of non-poly(A) terminators, identify novel genes regulated by attenuation of nascent transcripts close to the promoter, and demonstrate the widespread occurrence of Nrd1-bound 3'-antisense transcripts on genes that are poorly expressed. In addition, we show that Sen1 does not cross-link to many expected ncRNAs but surprisingly binds to pre-mRNA transcripts suggesting a role in 3' end formation and/or termination.Overall design: Six samples by adaptation of PAR-ClIP procedure
Data type: Other
Sample scope: Multiisolate
Relevance: ModelOrganism
Organization: Corden Lab, Molecular Bio and Gen, JHU
Literatures
  1. PMID: 21954178
Release date: 2011-09-08
Last updated: 2011-08-30
Statistics: 6 samples; 6 experiments; 6 runs