Saccharum hybrid cultivar SP90-1638 Transcriptome or Gene expression
Source: NCBI BioProject (ID PRJNA114679)
Source: NCBI BioProject (ID PRJNA114679)
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Project name: Saccharum hybrid cultivar SP90-1638
Description: Sugarcane one-eyed seed sets obtained from a variety sensitive to drought conditions (cv. SP90-1638, CTC, Brazil) were cultivated on moist sand for 15 days. The plants were transferred to pots containing moist sand and were irrigated with Hoagland’s solution (Hoagland and Arnon, 1950). Regular watering was maintained for 90 days and suppressed after this period for the experimental group. Leaves were collected 24 h, 72 h and 120 h after exposure to drought conditions for the control and experimental groups. Samples were collected and immediately frozen in liquid nitrogen. Leaves from six plantlets were used for each time point. Extraction of total RNA was performed separately on each sample pool.Keywords: time course of stress responseOverall design: RNA from experimental sample and from its respective control sample (untreated plants) was used for hybridization to dual channel arrays. Two biological replicates were used for each experimental point. The quantification of each hybridization was submitted in two files, one for each slide side (technical replicates).
Data type: Transcriptome or Gene expression
Sample scope: Multiisolate
Relevance: Agricultural
Organization: Signal Transduction Laboratory, Biochemistry, Universidade de São Paulo - USP
Release date: 2007-05-20
Last updated: 2006-06-01