Strain Lactobacillus casei TSDC10.1-1.1 (species Lactobacillus casei) was isolated from the fecal microbiota of a USA female at time point zero (bacterial isolates were sequenced from this donor on day 0 and 42). The species name was assigned by genome clustering.
Source: NCBI BioProject (ID PRJEB3560)
Source: NCBI BioProject (ID PRJEB3560)
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Project name: Lacticaseibacillus casei isolate:Lactobacillus casei TSDC10.1-1.1
Description: Strain Lactobacillus casei TSDC10.1-1.1 was isolated from the fecal microbiota of a USA female at day 0 (bacterial isolates were sequenced from this donor on day 0 and 42). The species name was assigned as the most abundant genus/species associated with a given cluster of genomes (with a cluster containing all strains with a coverage score >0.50). The genome was sequenced with paired-end 101bp reads on an Illumina HiSeq 2000. Genome length is 2844244. Coverage is 356.2x. N50 contig size is 25671.
Data type: Genome sequencing
Sample scope: Monoisolate
Organization: Washington University School of Medicine, St. Louis, MO. USA
Release date: 2013-07-09