RNA-seq of Pacific oyster Crassostrea gigas under different developmental stages and stress treatments
Source: CNGBdb Project (ID CNPhis0002883)
Source: CNGBdb Project (ID CNPhis0002883)
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Project name: Crassostrea gigas
Description: Deep sequencing of samples from different development stages, different adult organs and different stress treatments of Pacific oyster Crassostrea gigasOverall design: Samples of 38 developmental stages from egg to juvenile were analyzed using single-end 49 bp RNA-seq. Two libraries mixed by RNAs from different developmental stages were analyzed using paired-end 90 bp RNA-seq. A total of 11 samples mainly from 8 organs (mantle, gill,adductor muscle, digestive gland, hemocyte, labial palp, female gonad and male gonad) were analyzed using paired-end 90 bp RNA-seq. At the same time, single-end 49 bp RNA-seq was conducted on 61 samples collected from adult oysters subjected to 9 types of environmental stressors (exposure to air, salinity, temperature, and exposure to metals).
Data type: Transcriptome or Gene expression
Sample scope: Multiisolate
Relevance: Agricultural
Organization: Institute of Oceanology, Chinese Academy of Sciences
Accession in other database: PRJNA146329
Last updated: 2011-07-28