Taxonomy: Cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Trachemys; Trachemys scripta,
Latin Name:
Trachemys scripta elegans
Tested tissues: Pallium,
Project | Date | Technology | Tissue | Condition | Cell | PMID/DOI |
---|---|---|---|---|---|---|
Vthunter_110083 | 2018.05 | Drop-seq | Pallium | Normal | 18828 | Link |
Virus | Virus Name | GeneTop 5 cell types expressing viral receptor ordered by expression proportion |
---|---|---|
Classical swine fever virus |
Pallium-tsLeuB : 97.22% ; Pallium-tsLeuT : 97.22% ; Pallium-tsMG : 90.32% ; Pallium-tsExc1 : 84.96% ; Pallium-tsNPCs : 81.73% ; |
|
Dengue virus | ||
Adeno-associated virus - 2 |
Pallium-tsLeuT : 97.22% ; Pallium-tsLeuB : 97.22% ; Pallium-tsMG : 90.32% ; Pallium-tsExc1 : 84.96% ; Pallium-tsNPCs : 81.73% ; Pallium-tsOPC : 35.45% ; Pallium-tsEG : 34.57% ; Pallium-tsOlig : 33.55% ; Pallium-tsLeuB : 25.00% ; Pallium-tsNPCs : 23.29% ; Pallium-tsExc5 : 23.49% ; Pallium-tsExc1 : 23.09% ; Pallium-tsOlig : 18.71% ; Pallium-tsExc2 : 18.39% ; Pallium-tsExc3 : 17.58% ; |
|
Adeno-associated virus - 3 |
Pallium-tsLeuT : 97.22% ; Pallium-tsLeuB : 97.22% ; Pallium-tsMG : 90.32% ; Pallium-tsExc1 : 84.96% ; Pallium-tsNPCs : 81.73% ; |
|
Adeno-associated virus 9 |
Pallium-tsLeuT : 97.22% ; Pallium-tsLeuB : 97.22% ; Pallium-tsMG : 90.32% ; Pallium-tsExc1 : 84.96% ; Pallium-tsNPCs : 81.73% ; |
|
Adeno-associated virus - 8 |
Pallium-tsLeuT : 97.22% ; Pallium-tsLeuB : 97.22% ; Pallium-tsMG : 90.32% ; Pallium-tsExc1 : 84.96% ; Pallium-tsNPCs : 81.73% ; |
|
Venezuelan equine encephalitis virus |
Pallium-tsLeuT : 97.22% ; Pallium-tsLeuB : 97.22% ; Pallium-tsMG : 90.32% ; Pallium-tsExc1 : 84.96% ; Pallium-tsNPCs : 81.73% ; |
|
Sindbis virus |
Pallium-tsLeuT : 97.22% ; Pallium-tsLeuB : 97.22% ; Pallium-tsMG : 90.32% ; Pallium-tsExc1 : 84.96% ; Pallium-tsNPCs : 81.73% ; |
|
Simian rotavirus A strain RRV |
Pallium-tsExc1 : 95.13% ; Pallium-tsExc3 : 93.42% ; Pallium-tsExc4 : 93.19% ; Pallium-tsExc5 : 92.44% ; Pallium-tsExc2 : 92.36% ; Pallium-tsOPC : 35.45% ; Pallium-tsEG : 34.57% ; Pallium-tsOlig : 33.55% ; Pallium-tsLeuB : 25.00% ; Pallium-tsNPCs : 23.29% ; Pallium-tsEG : 26.90% ; Pallium-tsLeuB : 19.44% ; Pallium-tsLeuT : 11.11% ; Pallium-tsMG : 9.85% ; |
|
Hepacivirus C |
Pallium-tsExc4 : 93.49% ; Pallium-tsExc3 : 92.95% ; Pallium-tsExc1 : 91.31% ; Pallium-tsExc5 : 88.55% ; Pallium-tsEG : 84.17% ; Pallium-tsMur : 35.09% ; Pallium-doublets : 12.80% ; Pallium-tsEG : 20.92% ; Pallium-tsMG : 19.52% ; Pallium-tsLeuB : 19.44% ; Pallium-tsOlig : 14.19% ; Pallium-doublets : 13.41% ; Pallium-tsLeuT : 11.11% ; Pallium-tsLeuB : 13.89% ; Pallium-tsExc1 : 11.02% ; Pallium-tsExc5 : 10.09% ; Pallium-tsExc3 : 9.68% ; Pallium-tsExc1 : 11.44% ; |
|
Porcine reproductive and respiratory syndrome virus |
Pallium-tsOlig : 87.74% ; Pallium-tsEG : 33.67% ; Pallium-tsExc2 : 27.18% ; Pallium-tsInh2 : 21.84% ; Pallium-tsExc1 : 21.82% ; |
|
Human papillomavirus type 16 | ||
Rabies lyssavirus |
Pallium-tsExc2 : 85.63% ; Pallium-tsExc3 : 84.68% ; Pallium-tsExc4 : 79.99% ; Pallium-tsInh2 : 79.52% ; Pallium-tsExc5 : 79.34% ; Pallium-tsExc1 : 42.37% ; Pallium-tsExc3 : 30.36% ; Pallium-tsExc5 : 19.83% ; Pallium-tsExc4 : 18.09% ; Pallium-tsInh2 : 22.44% ; Pallium-tsMur : 12.28% ; |
|
Bovine leukemia virus |
Pallium-tsExc1 : 81.99% ; Pallium-tsExc5 : 74.91% ; Pallium-tsExc4 : 72.22% ; Pallium-tsExc3 : 71.62% ; Pallium-tsExc2 : 69.95% ; |
|
Chikungunya virus | ||
Enterovirus A71 |
Pallium-tsOlig : 71.61% ; Pallium-tsExc2 : 25.62% ; Pallium-tsExc5 : 23.73% ; Pallium-tsInh2 : 23.49% ; Pallium-tsEG : 21.65% ; |
|
Coxsackievirus A16 |
Pallium-tsOlig : 71.61% ; Pallium-tsExc2 : 25.62% ; Pallium-tsExc5 : 23.73% ; Pallium-tsInh2 : 23.49% ; Pallium-tsEG : 21.65% ; |
|
Human immunodeficiency virus 1 | ||
Feline immunodeficiency virus |
Pallium-tsEG : 63.74% ; Pallium-tsLeuB : 38.89% ; Pallium-tsLeuT : 22.22% ; Pallium-doublets : 17.07% ; Pallium-tsOPC : 11.55% ; |
|
Human immunodeficiency virus 2 | ||
Influenza A virus |
Pallium-tsExc1 : 59.11% ; Pallium-tsOlig : 56.13% ; Pallium-tsMur : 50.88% ; Pallium-tsExc5 : 46.81% ; Pallium-tsExc3 : 42.76% ; Pallium-tsExc3 : 43.98% ; Pallium-tsExc1 : 43.86% ; Pallium-tsExc2 : 40.23% ; Pallium-tsExc4 : 38.88% ; Pallium-tsExc5 : 36.95% ; Pallium-tsMur : 35.09% ; Pallium-doublets : 12.80% ; Pallium-tsExc1 : 32.63% ; Pallium-tsExc5 : 27.10% ; Pallium-tsExc4 : 25.49% ; Pallium-tsExc3 : 25.09% ; Pallium-tsExc2 : 21.84% ; |
|
Marburg marburgvirus |
Pallium-tsExc1 : 58.47% ; Pallium-tsExc4 : 46.24% ; Pallium-tsExc5 : 41.97% ; Pallium-tsExc3 : 36.75% ; Pallium-tsEG : 29.12% ; |
|
Ebola virus |
Pallium-tsExc1 : 58.47% ; Pallium-tsExc4 : 46.24% ; Pallium-tsExc5 : 41.97% ; Pallium-tsExc3 : 36.75% ; Pallium-tsEG : 29.12% ; |
|
Lassa mammarenavirus |
Pallium-tsExc1 : 58.47% ; Pallium-tsExc4 : 46.24% ; Pallium-tsExc5 : 41.97% ; Pallium-tsExc3 : 36.75% ; Pallium-tsEG : 29.12% ; Pallium-tsOlig : 56.77% ; Pallium-tsExc1 : 50.00% ; Pallium-tsExc5 : 41.74% ; Pallium-tsExc4 : 38.18% ; Pallium-tsExc3 : 38.06% ; Pallium-tsEG : 21.31% ; Pallium-tsExc1 : 20.13% ; Pallium-tsExc5 : 15.11% ; Pallium-tsExc2 : 13.46% ; Pallium-tsExc4 : 12.65% ; |
|
Lymphocytic choriomeningitis mammarenavirus | ||
Zika virus |
Pallium-tsExc1 : 58.47% ; Pallium-tsExc4 : 46.24% ; Pallium-tsExc5 : 41.97% ; Pallium-tsExc3 : 36.75% ; Pallium-tsEG : 29.12% ; |
|
Nipah henipavirus | ||
Hendra henipavirus | ||
Foot-and-mouth disease virus | ||
Human alphaherpesvirus 1 | ||
Simian sarcoma-associated virus |
Pallium-tsEG : 54.94% ; Pallium-tsExc2 : 22.99% ; Pallium-doublets : 20.12% ; Pallium-tsExc5 : 19.72% ; Pallium-tsExc3 : 18.42% ; |
|
Gibbon ape leukemia virus | ||
Feline leukemia virus strain B/lambda-B1 | ||
Mammalian orthoreovirus | ||
Severe acute respiratory syndrome coronavirus 2 | ||
Feline leukemia virus strain C/FA27 |
Pallium-tsExc2 : 40.56% ; Pallium-tsExc5 : 37.78% ; Pallium-tsExc1 : 35.59% ; Pallium-tsInh2 : 35.09% ; Pallium-tsExc4 : 34.41% ; |
|
Ross River virus |
Pallium-tsMur : 40.35% ; Pallium-doublets : 11.59% ; |
|
Onyong-nyong virus |
Pallium-tsMur : 40.35% ; Pallium-doublets : 11.59% ; |
|
Mayaro virus |
Pallium-tsMur : 40.35% ; Pallium-doublets : 11.59% ; |
|
Equid alphaherpesvirus 1 | ||
Human parvovirus B19 |
Pallium-tsOPC : 35.45% ; Pallium-tsEG : 34.57% ; Pallium-tsOlig : 33.55% ; Pallium-tsLeuB : 25.00% ; Pallium-tsNPCs : 23.29% ; |
|
Human metapneumovirus |
Pallium-tsOPC : 35.45% ; Pallium-tsEG : 34.57% ; Pallium-tsOlig : 33.55% ; Pallium-tsLeuB : 25.00% ; Pallium-tsNPCs : 23.29% ; |
|
Echovirus E1 | ||
Human betaherpesvirus 5 | ||
Echovirus E8 | ||
Human gammaherpesvirus 4 |
Pallium-tsOPC : 35.45% ; Pallium-tsEG : 34.57% ; Pallium-tsOlig : 33.55% ; Pallium-tsLeuB : 25.00% ; Pallium-tsNPCs : 23.29% ; |
|
Human rotavirus strain WA | ||
Coxsackievirus B2 |
Pallium-tsNPCs : 34.31% ; |
|
Human mastadenovirus A |
Pallium-tsNPCs : 34.31% ; |
|
Human mastadenovirus E |
Pallium-tsNPCs : 34.31% ; |
|
Human mastadenovirus C | ||
Human mastadenovirus D |
Pallium-tsNPCs : 34.31% ; |
|
Human mastadenovirus F |
Pallium-tsNPCs : 34.31% ; |
|
Coxsackievirus B4 |
Pallium-tsNPCs : 34.31% ; |
|
Coxsackievirus B3 |
Pallium-tsNPCs : 34.31% ; |
|
Coxsackievirus B1 |
Pallium-tsNPCs : 34.31% ; |
|
Coxsackievirus B5 |
Pallium-tsNPCs : 34.31% ; |
|
Coxsackievirus B6 |
Pallium-tsNPCs : 34.31% ; |
|
Vesicular stomatitis virus | ||
Human alphaherpesvirus 3 |
Pallium-tsExc1 : 31.99% ; Pallium-tsExc5 : 26.21% ; Pallium-tsExc4 : 24.16% ; Pallium-tsExc2 : 21.43% ; Pallium-tsExc3 : 20.02% ; |
|
Varicella Zoster Virus |
Pallium-tsExc1 : 31.99% ; Pallium-tsExc5 : 26.21% ; Pallium-tsExc4 : 24.16% ; Pallium-tsExc2 : 21.43% ; Pallium-tsExc3 : 20.02% ; |
|
Middle East respiratory syndrome-related coronavirus |
Pallium-tsExc2 : 28.08% ; Pallium-tsExc3 : 25.47% ; Pallium-tsExc5 : 24.79% ; Pallium-tsExc1 : 23.31% ; Pallium-tsInh2 : 21.08% ; |
|
Amphotropic murine leukemia virus |
Pallium-tsExc5 : 27.80% ; Pallium-tsInh2 : 26.81% ; Pallium-tsExc1 : 25.00% ; Pallium-tsExc4 : 22.94% ; Pallium-tsExc2 : 22.41% ; |
|
Xenotropic murine leukemia virus |
Pallium-tsExc2 : 22.91% ; Pallium-tsExc1 : 21.40% ; Pallium-tsExc5 : 20.07% ; Pallium-tsExc3 : 19.08% ; Pallium-tsInh2 : 18.52% ; |
|
Polytropic murine leukemia virus |
Pallium-tsExc2 : 22.91% ; Pallium-tsExc1 : 21.40% ; Pallium-tsExc5 : 20.07% ; Pallium-tsExc3 : 19.08% ; Pallium-tsInh2 : 18.52% ; |
|
Ecotropic murine leukemia virus |
Pallium-tsExc1 : 22.03% ; Pallium-tsExc3 : 19.74% ; Pallium-tsExc2 : 19.70% ; Pallium-tsExc5 : 18.89% ; Pallium-tsExc4 : 17.80% ; |
|
Oliveros mammarenavirus |
Pallium-tsEG : 21.31% ; Pallium-tsExc1 : 20.13% ; Pallium-tsExc5 : 15.11% ; Pallium-tsExc2 : 13.46% ; Pallium-tsExc4 : 12.65% ; |
|
Latino mammarenavirus |
Pallium-tsEG : 21.31% ; Pallium-tsExc1 : 20.13% ; Pallium-tsExc5 : 15.11% ; Pallium-tsExc2 : 13.46% ; Pallium-tsExc4 : 12.65% ; |
|
Human alphaherpesvirus 2 |
Pallium-tsOlig : 20.00% ; Pallium-tsExc3 : 12.22% ; Pallium-tsExc1 : 12.08% ; Pallium-tsExc2 : 11.74% ; Pallium-doublets : 10.98% ; |
|
Human rhinovirus A2 |
Pallium-tsMG : 19.52% ; Pallium-tsLeuB : 19.44% ; Pallium-tsOlig : 14.19% ; Pallium-doublets : 13.41% ; Pallium-tsLeuT : 11.11% ; |
|
Human gammaherpesvirus 8 |
Pallium-tsOlig : 15.48% ; |
|
Rinderpest morbillivirus |
Pallium-tsLeuT : 13.89% ; |
|
Measles morbillivirus |
Pallium-tsLeuT : 13.89% ; |
|
Machupo mammarenavirus |
Pallium-tsLeuB : 13.89% ; Pallium-tsExc1 : 11.02% ; Pallium-tsExc5 : 10.09% ; |
|
Argentinian mammarenavirus |
Pallium-tsLeuB : 13.89% ; Pallium-tsExc1 : 11.02% ; Pallium-tsExc5 : 10.09% ; |
|
Guanarito mammarenavirus |
Pallium-tsLeuB : 13.89% ; Pallium-tsExc1 : 11.02% ; Pallium-tsExc5 : 10.09% ; Pallium-tsExc3 : 9.68% ; |
|
Mouse mammary tumor virus |
Pallium-tsLeuB : 13.89% ; Pallium-tsExc1 : 11.02% ; Pallium-tsExc5 : 10.09% ; |
|
Phocine morbillivirus |
Pallium-tsLeuT : 13.89% ; |
|
Canine parvovirus |
Pallium-tsLeuB : 13.89% ; Pallium-tsExc1 : 11.02% ; Pallium-tsExc5 : 10.09% ; Pallium-tsExc3 : 9.68% ; |
|
Feline panleukopenia virus |
Pallium-tsLeuB : 13.89% ; Pallium-tsExc1 : 11.02% ; Pallium-tsExc5 : 10.09% ; |
|
Canine morbillivirus |
Pallium-tsLeuT : 13.89% ; |
|
Feline endogenous virus RD114 |
Pallium-tsExc1 : 12.71% ; Pallium-tsExc5 : 12.22% ; Pallium-tsExc3 : 10.53% ; Pallium-tsExc2 : 9.93% ; |
|
Baboon endogenous virus strain M7 |
Pallium-tsExc1 : 12.71% ; Pallium-tsExc5 : 12.22% ; Pallium-tsExc3 : 10.53% ; Pallium-tsExc2 : 9.93% ; |
|
Simian type D retrovirus -Tsukuba |
Pallium-tsExc1 : 12.71% ; Pallium-tsExc5 : 12.22% ; Pallium-tsExc3 : 10.53% ; Pallium-tsExc2 : 9.93% ; |
|
Japanese encephalitis virus |
Pallium-tsLeuB : 11.11% ; |
|
Human betaherpesvirus 7 |
Pallium-tsLeuT : 11.11% ; |
|
Simian immunodeficiency virus |
Pallium-tsLeuT : 11.11% ; |
|
Hepatitis E virus |
Pallium-tsExc4 : 10.25% ; Pallium-tsExc5 : 9.74% ; |