VThunter

a database for single-cell screening of virus target cells in animal kingdom

Rat

Scientific Name: Rattus norvegicus

Taxonomy: Cellular organisms-> Eukaryota-> Opisthokonta-> Metazoa-> Eumetazoa-> Bilateria-> Deuterostomia-> Chordata-> Craniata-> Vertebrata-> Gnathostomata-> Teleostomi-> Euteleostomi-> Sarcopterygii-> Dipnotetrapodomorpha-> Tetrapoda-> Amniota-> Mammalia-> Theria-> Eutheria-> Boreoeutheria-> Euarchontoglires-> Glires-> Rodentia-> Myomorpha-> Muroidea-> Muridae-> Murinae

Hepacivirus C

Family: Flaviviridae

Receptor: SCARB1

Receptor SCARB1 information

Summary: The protein encoded by this gene is a plasma membrane receptor for high density lipoprotein cholesterol (HDL). The encoded protein mediates cholesterol transfer to and from HDL. In addition, this protein is a receptor for hepatitis C virus glycoprotein E2. Several transcript variants encoding different isoforms have been found for this gene.[provided by RefSeq, Jan 2019] [NCBI] [Proteinatlas]

Data Source

Data set information

Project	Date	Technology	Tissue	Condition	Cell	PMID/DOI
Vthunter_1001	2019.12	10X Genomics	Lung	Normal	5029	Link
Vthunter_1002	2019.12	10X Genomics	Lung	Normal	5924	Link
Vthunter_1009	2017.11	Fluidigm C1	UrogenitalSinus	Normal	114	Link
Vthunter_110073	2019.12	MARS-seq	TotalBrain	Normal	2304	Link

Featureplot of receptors

mRNA expression of SCARB1 in human tissues [NCBI]

Expression: Biased expression in adrenal (RPKM 333.6), placenta (RPKM 91.6) and 4 other tissues?

Protein expression of SCARB1 in human tissues [Proteinatlas]