VThunter
a database for single-cell screening of virus target cells in animal kingdom
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Zebrafish

Scientific Name: Danio rerio

Taxonomy: Cellular organisms-> Eukaryota-> Opisthokonta-> Metazoa-> Eumetazoa-> Bilateria-> Deuterostomia-> Chordata-> Craniata-> Vertebrata-> Gnathostomata-> Teleostomi-> Euteleostomi-> Actinopterygii-> Actinopteri-> Neopterygii-> Teleostei-> Osteoglossocephalai-> Clupeocephala-> Otomorpha-> Ostariophysi-> Otophysi-> Cypriniphysae-> Cypriniformes-> Cyprinoidei-> Danionidae-> Danioninae-> Danio

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Ebola virus

Family: Filoviridae

Receptor: NPC1

Receptor NPC1 information

Summary: This gene encodes a large protein that resides in the limiting membrane of endosomes and lysosomes and mediates intracellular cholesterol trafficking via binding of cholesterol to its N-terminal domain. It is predicted to have a cytoplasmic C-terminus, 13 transmembrane domains, and 3 large loops in the lumen of the endosome - the last loop being at the N-terminus. This protein transports low-density lipoproteins to late endosomal/lysosomal compartments where they are hydrolized and released as free cholesterol. Defects in this gene cause Niemann-Pick type C disease, a rare autosomal recessive neurodegenerative disorder characterized by over accumulation of cholesterol and glycosphingolipids in late endosomal/lysosomal compartments.[provided by RefSeq, Aug 2009] [NCBI]  [Proteinatlas]

Data Source

Data set information

Project Date Technology Tissue Condition Cell PMID/DOI
Vthunter_1003 2017.09 Smart-seq2 KidneyMarrow Normal 245 Link
Vthunter_1020 2018.11 Smart-seq2 Gut Normal 252 Link
Vthunter_110071 2019.12 MARS-seq TotalBrain Normal 1920 Link
Featureplot of receptors

Featureplot of receptors

mRNA expression of NPC1 in human tissues   [NCBI]

Expression: Ubiquitous expression in adrenal (RPKM 13.9), brain (RPKM 10.0) and 24 other tissues?

Protein expression of NPC1 in human tissues   [Proteinatlas]